Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LATGIGTAKMILCGEHAVVYGEPAISVPFTQAVVTTNVET-SI-KTKFS--SAFFS--G----------DLDDMPDFLAGIKALVV-----------DVL---NEIGNGECVSIHVVSGVPIGRGLGSSAAVATSIARGLYKYFNQ---------------ELDSKKLLAIVNAAEKIAHGNASGVDAITVVSEKPVWYERDRKLEIMHFPKKITFVVADTGVPSETRDAVKDVQVLYKENQVEIGKIIHQLGDISREIKTHL-------EGDADTVKIGAAMNKAQSYLETLTVSDSSLEKLIKVARSNGADGAKLTGGGRGGCIIAVAKNQEIA---EQITKALHNAGAAQEWIFTIGEGSYESDSHRTHECGAN |
| 1KVK Chain:A ((6-372)) | -LLVSAPGKVILHGEHAVVHGKVALAVALNLRT-FLVLRPQSNGKVSLNLPNVGIKQVWDVATLQLLDT--EKLKKVAGLPRDCVGNEGLSLLAFLYLYLAICRKQRTLPSLDIMVWSELPPGAGLGSSAAYSVCVAAALLTACEEVTNPLKDRGSIGSWPEEDLKSINKWAYEGERVIHGNPSGVDNSVSTWGGALRYQQGK-MSSLKRLPALQILLTNTKVPRSTKALVAGVRSRLIKFPEIMAPLLTSIDAISLECERVLGEMAAAPV-PEQYLVLEELMDMNQHHLNALGVGHASLDQLCQVTAAHG-LHSKLTGAGGGGCGITLLKPGLERAKVEAAKQALTGCGFDC-WETSI------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132962 for 2365 contacts (-56.2/contact) +
2D Compatibility (PS) -32086 + (NN) -9975 + (LL) 696
1D Compatibility (HY) -14800 + (ID) 3900
Total energy: -193027.0 ( -81.62 by residue)
QMean score : 0.522
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