Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LYQMKNKLQVKIPGKLYVAGEYAVVE-----SGHTAILTAVNR-YITLTLEDSERN-ELWIPHYENPVSWPVGGELKPDGEHWTFTAEAINIATTFLKSEGIELTPVKMIIETELIDQSGAKYGLGSSAAATVAVINALMTKFYPEISMLKKFKLAALSHLVVQGNGSCGDIASCMYGGWIAYTTFDQEWVKHRLAYKSLEWFMKEPWPMLQIETLEEPV--P-TFSVGWTGTPVSTGKLVSQIHAFKQEDSKNYQHFLTRNNEIMKQIIQAFHTKDEELLYSAIKENRRILQEL--GTK---AGVNIETSLLKELADSAENMGGAGKSSGSGGGDCGIAFSKTKELAEKLVNEWEKLGIKHLPFHTGRVQITE |
| 3QT5 Chain:A ((1-307)) | ---MVKSGKARAHTNIALIKYWGKADETYIIPMNNSLSVTLDRFYTETKVTFDPDFTEDCLILNGN----------EVNAKEKEKIQNYMNIVRDLA----GNRLHARIESENYVPT----AAGLASSASAYAALAAACNEALSLNLSDTDLSRLARRGS--------G-SASRSIFGGFAEWEKGHDDLTSY------AH----------GINSNGWEKDLSMIFVVINNQSKK-SRSGMSLTRDTSR----FYQYWLDHVDEDLNEAKEAVKNQDFQRLGEVIEANGLRMHATNLGAQPPFTYLVQESYDAMAIVEQCRKANLPCYFTMDAGP-NVKVLVEKKN-KQAVMEQFLKV---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127811 for 2389 contacts (-53.5/contact) +
2D Compatibility (PS) -30912 + (NN) -10810 + (LL) 3256
1D Compatibility (HY) 4400 + (ID) 1950
Total energy: -163827.0 ( -68.58 by residue)
QMean score : 0.434
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