Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSRKKGIILVLSVILIFSIGLLVNNLMTNNKDTAKPKKKTVAAVKKKKETPPKPKEPFNIDFTGDIMFDWDLRPVLAEKGMDYPFNNVREELKSSDYTFVDLETAITTRTKKVPYQEFWIKSDPSSLTALKNAGVDMVNISNNHI-LDYYEDGLLDTTAALRANNLAYVGAGKNEDEAYQLKVADIKGNKVGFMSFCHFFPNTGWIADEDTPGVTNGYDLNLVEEKIKEERAKNKDIDYMVVYFHWGVEKTNTPVDYQTQYVKKLVDDNLVDAIVASHPHWLQGFEVYKDVPIAY--SLGNF-LFPDYVSGHSAETGIYK-LNFDQGKVTAHFDPGIISGNQINMLEGSSKTAQLNYLQSISPNATINSNGDISAK |
| 1T71 Chain:A ((1-281)) | ------------------------------------------------------MMNSIKFIFLGDVY---------GKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGL---------SLKHYEFLKEAGVNYITMGNHTWFQKLDLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFN--KAKIRITNLL-------------GTSVPLPFKTTNPFKVLKELILKRDC-DLHIVDFHAETTSEKNAFCMAF--------DGYVTTIFGTHTHVPSADLRITPKGSAYITDVGMCGPGFGSVIGANPEQSIRLFCAGSREHFEVSKCGAQLNGVFFEVDVNTKKVIKTEAIRIVEDDPRYLKQDYFNLI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T71.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52007 for 2361 contacts (-22.0/contact) +
2D Compatibility (PS) -29520 + (NN) -8580 + (LL) 7080
1D Compatibility (HY) -9200 + (ID) 2200
Total energy: -94427.0 ( -39.99 by residue)
QMean score : 0.291
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