Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKYKIVALLMLLCFAFAPGVLAADSDSYLENNGKMDIKTDRLQKTEEEKTKELEQMEETELDKNGIPLFTDEMDEKIAKEKAAEKAEYDRIKDSLFEEESTSGETVKKTKEKLFTGEYETTAVNTETPTTTETTVEDETKKTKQKTVGGAIAGTLVALAGGIYVAARNVFE |
2AKF Chain:A ((1-32)) | -------------------------------VSRLEEDVRNLNAIVQKLQERLDRLEETVQAK------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AKF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11383 for 122 contacts (93.3/contact) +
2D Compatibility (PS) -3805 + (NN) -2541 + (LL) 10252
1D Compatibility (HY) -800 + (ID) 300
Total energy: 14189.0 ( 116.30 by residue)
QMean score : 0.643
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