Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTASVFVAGKLLPETMEALSKWDVKAFSGEENITEAELINNVTEVDAIICPLSSPISAKVLESAKNLKIVANIGAGFDNIDVKKAQELGIAVTNTPDVSTEATAELTLGLILDVARR-------ISEGDRLCRETPEQFKGWAPTFFLGTELSGKTLGIIGLGRIGQAVAKRAAAFGMNII-YSGHQPKEAAKEWNAEFVSQ-KELLKRSDVVTIHAAYSPSLKHLLNETTLKTMKSSAFLINAARGPVVEEAALIKALETGVIAGAALDVFEFEPKIGEDFAKLD--NVVLTPHIGNATVETRAAMGKIAIANVEAVLAGKAPLHSVY |
4LCE Chain:A ((80-338)) | ------------------------------------------------------------LEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRV--QSVEQIREVASG---AARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMREEAAREIRRAITGRIP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LCE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116940 for 1864 contacts (-62.7/contact) +
2D Compatibility (PS) -27410 + (NN) -15927 + (LL) 5892
1D Compatibility (HY) -16800 + (ID) 5400
Total energy: -176585.0 ( -94.73 by residue)
QMean score : 0.515
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