Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKVRISVRRLVEFVRRSGSIDNRMTSSDRALEGTKIHQLLQKEAGEEYAAEVRLNLDRIVDGIAFSLDGRADGIINGRMIDEIKTTETPMDEITENFRPLHWAQLICYGFMLAEKSDLAEVTLQLTYYQVVDKEVKQFQRVMSREELSVFVDDLLSQYAIWAKASAAWEMKRNKTIQELTFPYDSYRSGQRELAIAVYRTISSEESLFCEAPTGIGKTMSTLFPGIKAMGEGKTDKLFYFTAKTITRQVAEDALDEMRRKGLAARSVTITAKDKICFLDERKCEPDHCQFARGYYDRLNEALFDMLQSEEAITRQVVESYARKYTLCPFELSLDVALFCDVIVCDYNYLFDPVVYLKRFFAEGP----GKYTFLVDEVHNLVDRARSMYSATLKKSAVMQVKRGLDAKNNKRLLNAINVMNKDMIALNKKLKDLDGTIYVQKNELIDWNESVLKFTFVAKEWLPQNTQSEIQADVLELYFESLRYVAIADFYDDRYVTQVTKSHGDLEIKQVCLDPSFLLSERLKLGSSSVLFSATLRPIDYYTNLLGGQEDTSRMIFSSPFKQKNMHLLVADYISTKYQMRENSMEAVVDALYALVSGENGNYLFFFPSFLYLQKVYDLFKEKYPNIRLQKQETAMDEERREHFLERFQAENVETLIGFCVLGGVFSEGVDLRGNRLVGAAVVGVGLAQLNHESDLIK---DYYNETIGRGFDYAYQIPGMNKVLQAVGRVIRGESDRGVVLLIEERFSADRYRA-LFPTHWNHAKTVKSTDDISREVAGFWRNS |
| 2VL7 Chain:A ((9-540)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RQWQAEKLGEAINALKHGKTLLLNAKPGLGKTVFVEVLGMQL-------------------------------------------KKKVLIFTR-----------------------------THSQLDSIYKNAKLLGLKTGFL-RANLKDKDVIAMTYPYLFQKPIRNSVFCNKDDCLKLEDYLIVIDEAHNLLE-ADKWFTRKISRKMLERALKEIEIVERLNR-IDAKKVKDYINLLIDYMSKLIKDGRCHELSLM--PLPDRETNGELIVVTRAYLNID------EGPVKKSSLKSLLKFVEMKGDLYNC----NGSLVKVPSDVNQLIEDALNVKTFKVLMSGTLPESLTLTN---------SYKIVVNESGRG-EYYYCPNVTSELRKRNSNIPIYSILLKRIYENSSKSVLVFFPSYEMLESVRIHLSGI-------------------PVIEENKKTRHEEVLELMKTGKYLVMLVML------FESLVLAGLPYPNVSDDMVRKRIERLSKLTGKDEDSIIHDLTAIVIKQTIGRAFRDPNDYVKIYLCDSRYREYFADLGISEKEIKLFA------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VL7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215156 for 3513 contacts (-61.2/contact) +
2D Compatibility (PS) -46621 + (NN) -4388 + (LL) 25664
1D Compatibility (HY) -16000 + (ID) 3700
Total energy: -260201.0 ( -74.07 by residue)
QMean score : 0.354
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