Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKNGNFLKKVGLAFLSILIVASTIFQTTVVKAATSYGSQFLNTVELLDKDGVPQTDFGYYDNMDVHYTWSIPNSTNVKAGDTMDFTLPSQLALATDLAFDVKDSKGQVVGTATVKKATNQVTLVFSDYVEKHSDVKGELDFWTAFNQKVITGNETVDLVFPLENGTTVIDVEVGEKTPVSPTETLFKYGWVDASNPSLIHWVVRVNYAKVNIPNAVFTDIIGAKQTLNFDSIKAFHGTYSADRVFTAGAPISSTNFSATSDGFSVALGNLTDSVQISYTTTTTDGGKSTQYDNTAKLAGTDFVTKQTSTWTPASGGGGEGGGTTGSVTLTKEDAKTKATLEGAEFKLVDSKGTVLQENITTNASGQLSIADLKFDTYQLIETKAPTGYKLDTTPVEFTIGENNQAITVTKENTLNTGSVELTKLDA-ATKATL---AGATFELQDKEGN-TLQTDLKTDENGVLKVTDLVPG-SYQFVETSAPTGYKLDNSPVS----FEVIAGETDQVVKVT-KENTLEVGSVELTKLDSATKATLAGATFELQDKEGNT--L--QTDLKTDENGVLKVTDLVPGSYQFVETSAPTGYKLDNSPVSFEVVAGETDQVVKVTKENTLEVGSVELTKLDSATKAT------LAGATFELQDKEGNTLQTGLTTDENGVLKVTDLVPGTYQFVETKAPIGYELDTTPVSFEIVAGETDPIVKVTKENTLVPPTPVPPTPVPPTPVPPTPVPPTPLPPVPYEPTVPPTKPEVPVTPKKTENSEDSPKTTPIRITQSLPKTGDTNSFAGLGVILIALSLSGLLLKRK |
| 2Y1V Chain:A ((313-571)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ENGDLTLTKTWVDATGAPIPAGAEATFDLVNAQTGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVER-SIKGYSADYQEITTAGEIAVKNWKDENPKPLDPTEPKVVTYGKKFVKVN-DKDNRLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKDA------LDRAVAAYNA----------------------LTAQQQTQQEKEKVDKA-QAAYNAAVIAANNAFEWVADKDNENVVKLVSDAQGRFEITGLLAGTYYLEETKQPAGYALLTSRQKFEVTATS------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y1V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 46609 for 1450 contacts (32.1/contact) +
2D Compatibility (PS) -25118 + (NN) -258 + (LL) 27068
1D Compatibility (HY) -6000 + (ID) 3400
Total energy: 38901.0 ( 26.83 by residue)
QMean score : 0.325
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