Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIMLVFITLILVSLPIAQQTEAKDASAFNKENSISSMAPPASPPASPKTPIEKKHADEIDKYIQGLDYNKNNVLVYHGDAVTNVPPRKGYKDGNEYIVVEKKKKSINQNNADIQVVNAISSLTYPGALVKANSELVENQPDVLPVKRDSLTLSIDLPGMTNQDNKIVVKNATKSNVNNAVN--TLVERWNEKYAQAYPNVSAKIDYDDEMAYSESQLIAKFGTAFKAVNNSLNVNFGAISEGKMQEEVISFKQ-IYYNVNVNEPTRPSRFFGKAVTKEQLQALGVNAENPPAY--ISSVAYGRQVYLKLSTNSHSTKVKAAFDAAVSGKSVSGD----VELTNIIKNSSFKAVIYGGSAKDEVQIIDGNLGDLRDILKKGATFNRETPGVPIAYTTNFLKDNELAVIKNNSEYIETTSKAYTDGKINIDHSGGYVAQFNISWDEVNYDPEGNEIVQHKNWSENNKSKLAHFTSSIYLPGNARNINVYAKECTGLAWEWWRTVIDDRNLPLVKNRNISIWGTTLYPKYSNKVDNPIE |
| 4RNZ Chain:A ((1-369)) | MERLVW----------------DKLTLLGFLEKNHIPQ------KLYYNLSSQDKELSAEI-------------------------------QSNVTYYTLR------DANNTLIQALIPISQDLQIHIYKKGEDYFLDFIPIIFTRKEKTLLLSL--------------QTSPYQDIIKATNDPLLANQLMNAYKKSVPFK--RLVKNDKIAIVYTRDYRV-GQAF----GQPTIKMAMVSSRSNQYYLFSHSNGHYYDSKAQEV--AGFLLETPVKYTRISS-------PFSYGRFHRPHYGVDYAAK-----HGSLIHSASDGRVGFMGVKAGYGKVVEIHL-----------------NELRLVYAHMSAFANGLKKGSFVKK---GQIIGRVGSTGPHLHFGVYKNS---RPINPLGYIRTA--------------------KSKLHGKQREVFLEKAQRSKQKLEELLKTHSFEKN------------------------------------SFYLLEGFLEHHHH------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RNZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 48284 for 2673 contacts (18.1/contact) +
2D Compatibility (PS) -36382 + (NN) -3715 + (LL) 10480
1D Compatibility (HY) -13200 + (ID) 3300
Total energy: 2167.0 ( 0.81 by residue)
QMean score : 0.267
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