Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVTTSPNIEGKQIIEYKKIVFGEVITGVNFMKDIGAGLRNFFGGRSQGYEDELINAREEAIREMEQRAKDIGANAVIGVDIDYEVLGADNGMLMVTASGTAVVIEAQDY
2LSE Chain:A ((1-101))
------MQEERKKLLEKLEKILDEVTDGAPD-EARERIEKLAKDVKDELEEGDAKNMIEKFRDEMEQMYKDAPNAVMEQLLEEIEKLLKKAGSL--VPRGSYLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2LSE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3313 for 672 contacts (-4.9/contact) +
2D Compatibility (PS) -10624 + (NN) -1094 + (LL) 1288
1D Compatibility (HY) 4000 + (ID) 1000
Total energy: -10743.0 ( -15.99 by residue)
QMean score : 0.164
(partial model without unconserved sides chains):
PDB file :
Tito_2LSE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LSE-query.scw
PDB file :
Tito_Scwrl_2LSE.pdb
: