Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDYLVKALAYDGMARVYAAVTTETIKEAQRRHDTW-SVSSAALGRTMTGTLFLGAMQKEDQKITVKIEGDGPIGPIVADSNAQGQIRG---YVTNPHVHFSELNEAGKLDVRRGVGTSGMLSVVKDLGFGENFTGQTPIVSGEIGEDFTYYLATSEQINSSVGVGVLV-NPDDTIEAAGGFMLQLLPGATDEIIDEIEKNLMALPTVSRMIEAGETPESILAKLAGGEDKLQILEKIPVSFECNCSKERFGSAIISLGKEEIRSMIEEDHGAEAECHFCRNTYDFSEEELKTLYEEAK |
| 1AGJ Chain:A ((1-242)) | -------------------EVSAEEIKKHEEKWNKYYGVNAFNLPKELFSKVDEKDRQKYPYNTIGNVFVKGQ-------TSATGVLIGKNTVLTNRHIAKFANGDPSKVSFRPSINTDDNGNTETPYG------------------EYEVKEILQEPFGAGVDLALIRLKPDQNGVSLGDKISPAKIGTSNDLKDGDKLELIGYPFDHKVNQMHRSEIELTTLSRG------------LRYYGFTVPGNSGSGIFNSNGELVGIHSSKVSHLDREHQINYGVG-IGNYVKRIINEKNE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AGJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10466 for 1965 contacts (-5.3/contact) +
2D Compatibility (PS) -24111 + (NN) 4783 + (LL) 3388
1D Compatibility (HY) -800 + (ID) 1750
Total energy: -28956.0 ( -14.74 by residue)
QMean score : 0.137
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