Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIKSISKSELEVMKIIWDFGRAVQYADVAGKLEEKNYSWKKNTVLTFLTRLVEKNLLSVKKVGRKNEYYALVSENEYLERQTETFVEEIYEGDVKGLITNLVQNDLISPDELEDLQQFWKRMKSPNE
1OKR Chain:A ((4-123))
-KTYEISSAEWEVMNIIWMKKY-ASANNIIEEIQMQK-DWSPKTIRTLITRLYKKGFIDRKKDNKIFQYYSLVEESDIKYKTSKNFINKVYKGGFNSLVLNFVEKEDLSQDEIEELRNILNKK-----
General information:
TITO was launched using:
RESULT:
Template:
1OKR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53664 for 715 contacts (-75.1/contact) +
2D Compatibility (PS) -12564 + (NN) -1251 + (LL) 364
1D Compatibility (HY) -10400 + (ID) 1700
Total energy: -79215.0 ( -110.79 by residue)
QMean score : 0.604
(partial model without unconserved sides chains):
PDB file :
Tito_1OKR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OKR-query.scw
PDB file :
Tito_Scwrl_1OKR.pdb
: