Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDEKEKNLNENSENESTPKREVEDTLHTPESAQPVQETPIVEGVTPEGEKFAGATEDAAEASSTNAFFEEASNKESEPARPAPGPRRAGTTGGGAVPPNRVNNGGSGNGNGEPPKRGKHFIGYFLTALIGVIIGGLIIFFVAWDNGDNADTTSNSNNKATKVEKVSVDTTSDVTKAVDKVQDAVVSVLNYQSSSSLDGTTTSEQEASSGSGVIYKKANGKAYIVTNNHVVADANKLEVTFTNGKKSEAKLLGTDEWNDLAVLEIDDKNVTTVAAFGDSDSLKLGEPAIAIGSPLGTEFSGSVTQGIISGLNRAVPVDTNGDGTEDWEADVIQTDAAINPGNSGGALINIEGQVIGINSMKISMENVEGISFAIPSNTVEPIIEQLETKGEVERPSLGVSLRDVDTIPETQQKNILKLPDSVDYGAMVQQVVSGSAADKAGLKQYDVIVELNGQKVTNSMTLRKILYGNDVKIGDKVKVKYYRDGKEKSTDIKLEAAKTTT |
3TJO Chain:B ((33-227)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------IADVVEKIAPAVVHIELFRKLP----FSKREVPVASGSGFIVSE---DGLIVTNAHVVTNKHRVKVELKNGATYEAKIKDVDEKADIALIKIDHQGKLPVLLLGRSSELRPGEFVVAIGSPFSLQ--NTVTTGIVSTTQ-----------------DYIQTDAIINYGNAGGPLVNLDGEVIGINTLKVT----AGISFAIPSDKIKKFLTE-------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TJO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64351 for 1500 contacts (-42.9/contact) +
2D Compatibility (PS) -19311 + (NN) -2760 + (LL) 13240
1D Compatibility (HY) -17200 + (ID) 3750
Total energy: -94132.0 ( -62.75 by residue)
QMean score : 0.489
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