Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MSIINS---NFRSLGSYIMENIYKIPNYQREYSWEETELEDLWMDLSQIINGETESHFFGQIVIHVDKKEKAKLIIDGQQRTSTAVIFLAAMRELFTE---------MYNAGWDDAQFDAQDITTKFIGRYTQTRDERKLI-LGENDKSYFSNRIQSVSSEQLGLQKATKSQKRINFAY---NYFYKKLEEEINSSDFLEDKYG-----LLKTFF--------STFTEKCSVMFVETDDFNEAFIIFETLNARGKDLETADLLKNHLFKIANKKVGEVKKNWKQMLEFIGTVDTTKYIRHFWNSQNVFIREKDLYKEIRKKITTQFEAIIFIDDLVRLSEVYGGMKNPAEDNFFETDSQQVLNDLKRLGAKSFY--PIILAMVKKDYGPNEIYEVLSAIEVLVVR----NFVISGLVANKYETEFSKIAFKIYQEEVESVTEIINLIRTNIIADDVFLNNFSSFKTTNKLRLRYILKKINDSYSKEIAVLNDNNKIHLEHIMPIKADGWDIIKEEHEEYLWKIGNLTLLGSE--YNKKSTNKIFNDKKDIYEYSEVQLTRKLLDYDEWNIDVIKERQVELAELAVNIWKV |
| 1JVN Chain:A ((1-555)) | GSHMPVVHVIDVESGNLQSLTNAIEHLGYEVQLVKSPKDFNISGTSRLILP---------GVGNYGHFVDNLFNRGFEKPIREYIE-SGKPIMGIVGLQALFAGSVESPKSTGLNYIDFKLSRFDDSEKPVPEIGWNSCIPSENLFFGLDPYKRYYFVHSFAAILNSEKKKNLENDGWKIAKAKYGSEEFIAAVNKNNIFATQFHPEKSGKAGLNVIENFLKQQSPPIPNYSAEEKELLMNDYSNYGLTRRIIACLDVRTND-------QGDLVV-TKGDLGKPVQLAQKYYQ--QGAD----EVTFLNITDCPLKDTPMLEVLKQAAKTVFVPLTVG----------GGIKDIVDVDGTKIPALEVASLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNG------EKYCWYQCTIKGG---RESRDLGVWELTRACEALGAGEILLNCIDK--------DGSNSGYD---LELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKTR-----ADACLGAGMFHRGEFTVNDVKEYLLE-HGLKVRMDEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44449 for 4250 contacts (-10.5/contact) +
2D Compatibility (PS) -51113 + (NN) -4080 + (LL) 6080
1D Compatibility (HY) -13200 + (ID) 3700
Total energy: -110462.0 ( -25.99 by residue)
QMean score : 0.218
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