Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSAHSQLEQQLQQIKKAKITAETDADQTRRKQNEQDWLEEDSNQLTQEKRVLLDFLRSGWQGE-EASSFHRYLEEQQHEESQVWRRDLQDKRSDLDTELQENKDRLHTLEAKQATLQKEWSQ
1TUZ Chain:A ((1-118))
MAKERGLI----SPSDFAQLQKYMEYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDVSCYFSLLEGGRPEDKLEWS-
General information:
TITO was launched using:
RESULT:
Template:
1TUZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 43061 for 739 contacts (58.3/contact) +
2D Compatibility (PS) -12193 + (NN) -1930 + (LL) 640
1D Compatibility (HY) -2000 + (ID) 600
Total energy: 26978.0 ( 36.51 by residue)
QMean score : 0.241
(partial model without unconserved sides chains):
PDB file :
Tito_1TUZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TUZ-query.scw
PDB file :
Tito_Scwrl_1TUZ.pdb
: