Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISIVLVSHSQKITEGLQEMIVEMVGDTVHIISSGGTGDG--RLGT------------------NAIMIADNIATCTNSEHIYIFCDI-GSAILSAETALELLDTDLLEKTTIIDAPLVEGAFTAAVQSLVNPSKEAILQELTNVH
2IU4 Chain:A ((44-120))
----------------------------VPIISGGGSGHEPAHVGYVGSGMLAAAVTGPLFIPPKSKNILKAIRQVNSGKGVFVIIKNFEADLKEFNEAIKEART-----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2IU4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34068 for 314 contacts (-108.5/contact) +
2D Compatibility (PS) -6408 + (NN) -5724 + (LL) 6324
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -43676.0 ( -139.10 by residue)
QMean score : 0.281
(partial model without unconserved sides chains):
PDB file :
Tito_2IU4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IU4-query.scw
PDB file :
Tito_Scwrl_2IU4.pdb
: