Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNKITERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAF----EVGDKELKDVVQGFRAMNLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVNDDGVLTGHITDGTGYMRALKEAGHDIIGKKMTICGAGGAATAICI--QAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF |
2D5C Chain:B ((4-244)) | ---------------FAVLGHPVAHSLSPAMHAFALESLGLEGSYEAWDTPLEALPGRLKEVRRAFRGVNL-----TLPLKEAALAHLDWVSPEAQRIGAVNTVLQVEGRLFGFNTDAPGFLEALKAGGIPLKGPALVLGAGGAGRAVAFALREAGL----EVWVWNRTPQ---RALALAEEFGLRA------VPLEKAREAR-------LLVNATRVGL----ASPL--PAELFPEEGAAVDLVYRPLWTRFLREAKAKGLKVQTGLPMLAWQGALAFRLWT-------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2D5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -138555 for 2012 contacts (-68.9/contact) +
2D Compatibility (PS) -24712 + (NN) -6199 + (LL) 4572
1D Compatibility (HY) -14400 + (ID) 4200
Total energy: -183494.0 ( -91.20 by residue)
QMean score : 0.565
|
|
|