Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMRKVYEIFILDWRRLFKAPLALLLVIALIILPSLYAWFNIEALWDPYSNTSGIKVAVSIDDEGAEIDVPGKKPQQVNVGNQLKKTLEKNKKLGWTFVSEDEAKKGVKSGKYYASIHIPKDFSEDMVSVVNDNVTKPTIDYSVNEKINAIAPKMTESGATTIVNQISSEFVGTVSKAVLEEFNKAGIDLENELPTIRRLKTKVFQVQDALPELKKMGAEAVKIEAKLPELKAKANQVVELNEKIPELNKATENVLLVEQQLPKIDQLGQDILVLQKKIPEIKQIAESVKEVDENFGTIKKTVNDAVNESGKALDVIDTAMAAIPTVEKIAQNGSGYVDKVSDFADEINKSFDTLAPAIKQNLTLMKQMADNIYQVTEAIKNGSITPEQAITELKKMEQDIDSLQQMITKQTATLESLNETLPNKPFTDLIANLKTINSQLGAQKETITKVRTELENGAQPSEELLNQLNEQAK-----NVSEKLDQILANYDSEIVPAIKVGLNQIQ-----GDLKDSQKLLETLQAKIPEITQVLKDSRETLQTGQTYLEEFQERLPEIQKTLDEATKVINTKLDTIIAGINEAANFYQNDYPNVKANIKKAANFIRDDLPGLEKEINQASGLIQEKMPEFEKAIKIAADLSREELPEFEKAINNAANKITDFDKNYDLQSIIKMLRNDADKDSSFIASPVKLKETSYYPIPNYGSASSPFYTALCLWVGALLLISLLRVDVEVPAGIFSHYHRYFGRLLTFLSIGLMQALIVTLGNIFLLGVSIAEPLLHVLFSMFISVVFMTIVYTLVSLFNNVGKGIAIILLVLQISGAGGNFPIQVSPPFFQAIYPFLPFTYAVSLIRESVGGLYMPTVWIDMSVLAGFAILFITLGILLKKPLDKVVPKLSEKAKRSKLIH
2YFA Chain:A ((18-253))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSHMGDIGQLNKDLTDLRIARLQYMIANGD-DTAAANTLAKLDAFSKQQAYLATTFKSPENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQQLLQVRIDVRGYIAENSSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRQFRDAVANITTSRAEMTVQGADIVKRSDALYQIQLER------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2YFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) 6778 for 1617 contacts (4.2/contact) +
2D Compatibility (PS) -24320 + (NN) -5777 + (LL) 51208
1D Compatibility (HY) -1600 + (ID) 1100
Total energy: 25189.0 ( 15.58 by residue)
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_2YFA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YFA-query.scw
PDB file : Tito_Scwrl_2YFA.pdb: