Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VANKFKTLDKMVYNLLLEKIKNGELVPNEHLAEEKLAREFGVSRSPLRKAIATLTAQGIVSYHENSGAVLNDCIVDADRYVQLMETIEIFVDAAIAKAAHFG-YEMDLEKLYARMQEMERFSYLTDLENYFDAHHRFILCLISFAENPYQVRIVKQIFFQMVHFSDGINMFKSVEIREWTNKKSNQIYELLAEGKIELARKTIKSMFAELTIQAYR
3SXY Chain:A ((10-204))
--------RTKVYNLLKEMILNHELKLGEKLNVRELSEKLGISFTPVRDALLQLATEGLVKVVPRVGFFVTDV--DEKFIRETIETRIMMEVFCLENYFDKIAGSEELLEIKGEIDDVEKS---AKREIFDDSDERLHKLFIRASGNELIISLYEKIWDRIDLVRHL------NERYVVSNREHKELIERIISGDKEGAIEKLKEHLKNVEAET--
General information:
TITO was launched using:
RESULT:
Template:
3SXY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114932 for 1423 contacts (-80.8/contact) +
2D Compatibility (PS) -21303 + (NN) -12323 + (LL) 2072
1D Compatibility (HY) -8800 + (ID) 2050
Total energy: -157336.0 ( -110.57 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_3SXY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SXY-query.scw
PDB file :
Tito_Scwrl_3SXY.pdb
: