Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIWIKSLLVITACIFSLTLLNTKYTFYSPTVKLESAKVVYKLNNEPFNVRLDVPLVNQMDAPTLFNGCEVTSLAMLLQFNGKRVTKNELANNLSTTPIEQNGLHGNPDKAFVGSISGDSPGLGVNHAPIAKLAAKYVNEAHVHDISGNSIQDIITVLSTGAPVWIITTTD---YHAPKNWQTVQTKEGKKKITYSMHSVIITGFDKN-----NFYINDPYGHKNRAVKRSVLEEGWSAMGKQAIYLSRP |
3U8E Chain:A ((116-186)) | ------------------------------------------------------------------------------------------------------------------------------------------------------SSALLDAVAK-QPVSVNIYTSSTSFQLYTGPGIFAGSSCSDDPATVDHTVLIVGYGSNGTNADYWIVKNSWG---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U8E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27426 for 306 contacts (-89.6/contact) +
2D Compatibility (PS) -6806 + (NN) -2146 + (LL) 10868
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -28760.0 ( -93.99 by residue)
QMean score : 0.392
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