Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVGI-NTDTENISELLKTYWSIQRISAGYADQNAASLGLTIQQLAMINVIYSTPGISVADLTKRLIITGSSAAANVDGLISLGLVVKLNKTIPNDSMDLTLKLSKKGEDLSKRSTANAFMYKAMMKVFENLTENEIEELIRLNKKVETLLKKSK---
3BJ6 Chain:A ((1-152))
-SNAMTHETDQLYQAVQATRPLLRNITAAVERGTLREGVTVGQRAILEGLSLTPGATAPQLGAALQMKRQYISRILQEVQRAGLIERRTN--PEHARSHRYWLTPRGEAIITAIRADEM--AKLALFSEGFSSVELTAYHKVQLALTRFFADLAKEA
General information:
TITO was launched using:
RESULT:
Template:
3BJ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49439 for 911 contacts (-54.3/contact) +
2D Compatibility (PS) -15954 + (NN) -6566 + (LL) 764
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -74195.0 ( -81.44 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_3BJ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BJ6-query.scw
PDB file :
Tito_Scwrl_3BJ6.pdb
: