Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIGKRIKNLRLSKNLTQEELGERTDLTKGYISQLERDLSSPSIETLFAILEVLGSTPKDFFDEEEHNQKVIYGELEHTFFEDEEKGYRIKWLVPESNEKEMEPVLLEIEANSCFKSFEPSLSETFAYVLKGEVTVLLGRNEYVAKKGEAIYFHAADEHQIINRSSEHATLILVATESYL
4FN3 Chain:A ((16-72))
------IKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKALELIMKGLEVSDVVFFE---------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4FN3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25714 for 373 contacts (-68.9/contact) +
2D Compatibility (PS) -6334 + (NN) -4789 + (LL) 10088
1D Compatibility (HY) -5200 + (ID) 1050
Total energy: -32999.0 ( -88.47 by residue)
QMean score : 0.695
(partial model without unconserved sides chains):
PDB file :
Tito_4FN3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FN3-query.scw
PDB file :
Tito_Scwrl_4FN3.pdb
: