Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDILRDIGVIARALDSISNIEFKELNLAKGQFIYLVRICENQGIIQEKLVDILKIDRTTASRAIKNLEKNGLIIKKQNKNNKKNKLLFPTEKGQQLYPLIIRENEYSNAVALKGFTEAEINMLTDALKKVKENIADDWLYVKKGNKRSY
3BPV Chain:A ((6-140))
--PLKGLLSIILRSHRVFIGRELGHLNLTDAQVACLLRIHREPGIKQDELATFFHVDKGTIARTLRRLEESGFIEREQDPENRRRYILEVTRRGEEIIPLILKVEERWEDLLFRDFTEDERKLFRKMCRRLAEEAVR-------------
General information:
TITO was launched using:
RESULT:
Template:
3BPV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34928 for 852 contacts (-41.0/contact) +
2D Compatibility (PS) -14479 + (NN) -3039 + (LL) 916
1D Compatibility (HY) -9600 + (ID) 1750
Total energy: -62880.0 ( -73.80 by residue)
QMean score : 0.413
(partial model without unconserved sides chains):
PDB file :
Tito_3BPV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BPV-query.scw
PDB file :
Tito_Scwrl_3BPV.pdb
: