Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFVKNNETAVFALGGLGEIGKNTYGVQFQDEIILIDAGIKFPEDELLGIDYVIPDYSYLVKNKDKIKGLFITHGHEDHIGGVPYLLRDL-NIPIYAGKLASALIRNKLEEHGL-L----------------RQTKIYEYEEDDVFKF-RKTSISFFRTTHSIPDTYGIVVKT--PSGNIVHTGDFKFDFTPVGEPANLTKMAEIGKEGVLCLLSDSTNAEVPNFTMSERVVGESIKNIFRD---VEGRIIFATFASNIYRLQQVVESSIETGRK-------IAVFGRSMESAMEIGKQ-LGYIQAP---------KDTFI-------D-VHQLNKT-PAGNVTILCT-GS--QGEPMAALSRIANGTHRQIQIQPGDTVVFSSSPIPGNTTSVN-R------TIN-----LLYQAGAEVIHGKVNNI-HTSGHGGQQEQKLMLRLMK--PKFFMPIHGEFRMQKIHAESAE-ECGVPEENSFIMANGDVLALTSETAHVAGKIHAASVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKNSRVMAGPDIISRGFIYMRESGNLIGEAQGLLTRHLNKVMEQKTTQWSEIKNEITDTLQPFLYEKTKRRPMILPIIMEV |
| 2YCB Chain:A ((178-636)) | ------DWARLTAMGGFREVGRSCLYLQTPNSRVLLDCGVNVAGGDD---KNSYPYLNVPEFTLDSLDAVIITHAHLDHSGFLPYLYHYGYDGPVYCTAPTRDLMTLLQLDHIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLHNAGH-ILGSAMAHLHIGDGQHNMVYTGDFKYEQSRLL-----EAAANR-FPRIETLVMESTYGGHEDVQPSRNRAEKELVKTIYSTLRRGGKILIPVFA--VGRAQELMIVLEEYIRTGIIDEVPVYIDGMIWE-ANAIHTARPEYLSKDLRDQIFHMGHNPFISDIFHKVNGMDERREIVEGEPSIILSTSGMLTGGNSLEYFKWLCE--------DPDNSLVFVGYQAEGSLGRRIQKGWKEIPLKDEDDKMRVYNVRMNIK-----TIEGFSGHSDRRQLMEYVKRISPKPEKILLCHGDNYKTLDLASSIYRTYRI---ETKTPLNLETVRIQ---------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138793 for 3358 contacts (-41.3/contact) +
2D Compatibility (PS) -42888 + (NN) -18756 + (LL) 11204
1D Compatibility (HY) -10800 + (ID) 3750
Total energy: -203783.0 ( -60.69 by residue)
QMean score : 0.437
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