Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELKHVIPNMEKTFGQLEFAGEGKVEQRRING-KPTILSRSYNLYSNIQRADDIVVILPAEAGEKHFEIEQKVKLVNPRITAEGYKIGTRGFTNYVMYADDIVKV
1L8Z Chain:A ((1-83))
----GKLPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKL------------------
General information:
TITO was launched using:
RESULT:
Template:
1L8Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13231 for 538 contacts (24.6/contact) +
2D Compatibility (PS) -8254 + (NN) 161 + (LL) 1692
1D Compatibility (HY) 1200 + (ID) 650
Total energy: 7380.0 ( 13.72 by residue)
QMean score : -0.034
(partial model without unconserved sides chains):
PDB file :
Tito_1L8Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L8Z-query.scw
PDB file :
Tito_Scwrl_1L8Z.pdb
: