Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIYVIGIGPGDKRLMTGEALQAIEDAEVIVGYVTYIKLIKELIK-DKEVVKTGMRREIDRCQEAVDIALTGKKVAVVSSGDAGIYGMAGLVLELAEKSNPDLEVKVIPGITASIGAAAVLGAPIMHDFCHISLSDLMTPWEVIEKRLTHAAMADFVVCFYNPRSKGRANHLANAFQKMMEHKSGDTVVGIVKDVGRKEERKIITTMQGIDYELVDMTTVVIVGNKETYVKNGKMITPRGYSL
2BB3 Chain:A ((23-217))
MIWIVGSGTC-RGQTTERAKEIIERAEVIYGSRRALELAGVVDDSRARILRSFKGD---EIRRIMEE-GREREVAVISTGDPMVAGLGRVLREI--AE--DVEIKIEPAISSVQVALARLKVDL-SEVAVVDC----FD-AELTELL----KYRHLLILADSH--------FP----LER-LG-KRRVVLLENLCMEGERIREGNADSIEL--ESDYTIIFVEREV----------------
General information:
TITO was launched using:
RESULT:
Template:
2BB3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148282 for 1482 contacts (-100.1/contact) +
2D Compatibility (PS) -21170 + (NN) -7167 + (LL) 2920
1D Compatibility (HY) -8400 + (ID) 1850
Total energy: -183949.0 ( -124.12 by residue)
QMean score : 0.570
(partial model without unconserved sides chains):
PDB file :
Tito_2BB3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BB3-query.scw
PDB file :
Tito_Scwrl_2BB3.pdb
: