Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKKLFRQDENILNSELAEDLPI-PRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKRPTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCTGLTLNFALNYGGRSEIITAAKEAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRTSGELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL
2E9C Chain:B ((17-239))
-----------------------GCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSS----------SALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANR-------
General information:
TITO was launched using:
RESULT:
Template:
2E9C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95198 for 1590 contacts (-59.9/contact) +
2D Compatibility (PS) -23367 + (NN) -10500 + (LL) 2520
1D Compatibility (HY) -13200 + (ID) 4950
Total energy: -144695.0 ( -91.00 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_2E9C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E9C-query.scw
PDB file :
Tito_Scwrl_2E9C.pdb
: