Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKSYHVAVVGATGAVGTQMIELLEEAATFKIKQVSFLSSIRSAGKKLSFRGEEVTIQEATPESFEGVDIALFSAGGSVSKALAKEAVKRGAIVIDNTSAYRMDPTVPLVVPEVNEKALFSHNGIIANPNCSTIQMVAALEPIREAFGLNRIIVSTYQAVSGSGVSAIQELKDGSKAVLDNK----EFTPQIMPVKGDKKHYPIAFNALPQIDVFTENDYTYEEMKMINETKKIMEDNTIKVSATCVRIPVVSGHSESVYIEVDKEGITAKEIQNALKNAPGIVLEDDPANQVYPQAVQAAGKKEVFVGRIRADIDDPKGFHMWIVSDNLLKGAAWNSIQIAESLVKLAII |
2GZ2 Chain:B ((3-347)) | ----YTVAVVGATGAVGAQMIKMLEES-TLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAFEGVDIALFSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPNCSTIQMMVALEPVRQKWGLDRIIVSTYQAVSGAGMGAILETQRELREVLNDGVKPCDLHAEILPSGGDKKHYPIAFNALPQIDVFTDNDYTYEEMKMTKETKKIMEDDSIAVSATCVRIPVLSAHSESVYIET-KEVAPIEEVKAAIAAFPGAVLEDDVAHQIYPQAINAVGSRDTFVGRIRKDLDAEKGIHMWVVSDNLLKGAAWNSVQIAETLHERGLV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GZ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178977 for 3018 contacts (-59.3/contact) +
2D Compatibility (PS) -36660 + (NN) -14968 + (LL) 364
1D Compatibility (HY) -36400 + (ID) 10950
Total energy: -277591.0 ( -91.98 by residue)
QMean score : 0.630
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