Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKHKVGILGGTFDPPHLAHLHMAEEAKKQLELEKILFLPNKIPPHKHISGMASINERVEMLQLMIEGIDSFEIDTRELMRTGKSYTYDTMRDMIIEQPDTDFYFIIGGDMVEYLPKWYHIDDLVKMVTFVGVNRPLYQPEVPYDVVKIDMPKTTISSTEIRNDIEH---AEAFLPEKVWSYIKEHQLYGKK
1KAQ Chain:F ((8-189))---KIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQI----------DSFHRVEMLKLAIQSNPSFKLELVEMEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGV------VETPYPLLFADVPEFEVSSTMIRERFKSKKPTDYLIPDKVKKYVEEN------


General information:
TITO was launched using:
RESULT:

Template: 1KAQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125519 for 1247 contacts (-100.7/contact) +
2D Compatibility (PS) -17406 + (NN) -4917 + (LL) 1156
1D Compatibility (HY) -17600 + (ID) 3700
Total energy: -167986.0 ( -134.71 by residue)
QMean score : 0.522

(partial model without unconserved sides chains):
PDB file : Tito_1KAQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KAQ-query.scw
PDB file : Tito_Scwrl_1KAQ.pdb: