Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIGIIGAMEEEVELLKNSMSSVEEIVIGGAKFYIGEIASKEVVLLESGIGKVNAALGTTLMADRFKPEVIINTGSAGGMAEGLAVGDVIISDRLAYGDVDVTEFGYTYGQVPRMPAFYQGDAVLLKKAETIYREYFATSENKAVYGLVVTNDSFIMRPDQHEIIRTFFPDVKAVEMEAAAIAQVAYQFDIPFLIIRAISDLANQEATISFDEFIHLAAKQSATCIIELLKTI
1NC3 Chain:B ((11-239))MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVALLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADVTAFGYEYGQLPGCPAGFKAD----DKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSSLMVESLVQKL


General information:
TITO was launched using:
RESULT:

Template: 1NC3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -171134 for 2094 contacts (-81.7/contact) +
2D Compatibility (PS) -25015 + (NN) -12697 + (LL) 688
1D Compatibility (HY) -22400 + (ID) 5700
Total energy: -236258.0 ( -112.83 by residue)
QMean score : 0.629

(partial model without unconserved sides chains):
PDB file : Tito_1NC3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NC3-query.scw
PDB file : Tito_Scwrl_1NC3.pdb: