Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYAIIETGGKQIKVEAGQEIYVE-KLAGEVGDVVTFDKVLFVGGD-SAKVGVPFV--EGATVTAKVEKQGRAKKLTVYKYKPKKNYHKKQGHRQPYTKLTIDAINA
4CE4 Chain:V ((99-195))
LFAVVHFAGHQWKVTAEDLILIENELDVACGERIRLEKVLLVGADNFTLLGKPLLGKELVRVEATVIEKTESWPKINMKFQKRKNYQRKRITVNPQTVLRINSIE-
General information:
TITO was launched using:
RESULT:
Template:
4CE4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20136 for 477 contacts (-42.2/contact) +
2D Compatibility (PS) -10089 + (NN) 991 + (LL) 64
1D Compatibility (HY) -8000 + (ID) 1450
Total energy: -38620.0 ( -80.96 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_4CE4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CE4-query.scw
PDB file :
Tito_Scwrl_4CE4.pdb
: