Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYFDNSATTKPNAAVLETYTKVASNYFANPSSLHRFGAKSKELLDASRKQIAAMMSALPEEIIFTSGGTEGNNLAIKGLVYSY-------QNRGKHIITSSIEHPSVRVVMEELEQ-EGFTVKYLPVDK-NGVIKLEELKAALTDETILVSIMGVNNEVGSIQPLQEIGEMLSVL---------ENTFFHVDFVQAIGKIPLTLDANSIDLLTFSGHKFHALRGTGILFKRKNVHLHPEILG---GGQEMGYRSGTENLAGNVALAKALRLTLENEP-RKEALIEIRDYLLTKIAQMSDMTVHTK----QSVAAPHIVCFSAKGHR--GEILVHALEKEDIYISTTSACSSKQK-LASSTLKAMGVTDEEATGAVRVSLSYENRLSEAKIFIQKLQEIIENLNKVVK |
| 3A9Z Chain:A ((19-431)) | KVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQ--TRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGPR-IGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQ--CQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEGP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148584 for 3357 contacts (-44.3/contact) +
2D Compatibility (PS) -40814 + (NN) -19930 + (LL) 404
1D Compatibility (HY) -18400 + (ID) 6200
Total energy: -233524.0 ( -69.56 by residue)
QMean score : 0.526
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