Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQEEIIIAAQKWMQSHFEKETTGHDWEHIKRVWHLSKQIQVTEGGDKFAIELAALFHDYNDSKLTEDPLQATEIITTWLREKEIPEDVISKIIRIIQAVSFKNGKNPIQASTIEEKIVQDADRLDAIGAIGIARTFTYGGAHNREI-------------ANRDHPENTTLQHFYDKLLLIQTQL-KTKTGRELAGEKQII-MQDFIHALEKELKI- |
| 2PJQ Chain:A ((2-215)) | -ITETQLTAIQTYALQKLAHDHSGHGRDHLQRVNRLARRLAKDEGANLNLTLAAAWLHDVIDA---------HQDLIVQLNAQNVTADDQTAIFAIIDHMSFSKSFNGPQKLSLEGQVVQDADRLDAIGAIGIARALYYSGHVGEKIYDPAIAPREHMTREQYRHQPGTAINHFYEKLFKLAA-LMNTDTAKALAAHRTAVMH-EFVDQFKAEWTAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PJQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19746 for 1426 contacts (-13.8/contact) +
2D Compatibility (PS) -19230 + (NN) -2861 + (LL) 1068
1D Compatibility (HY) 4000 + (ID) 1400
Total energy: -38169.0 ( -26.77 by residue)
QMean score : 0.306
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