Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEELLKRFTKYVKVDTQSNEESTVCPTTPGQMELANILVTELKEIGMQEVTVD---EFGYVMATLPSNSTKEVPVIGFLAHLDTATDLTGKNVQPQVHENYDGKDIILNKDLNVVLSPKQFPELAGYKGKTLITTDGTTLLGADDKAGITEIMVAMNHLINHPEIKHGKIRIAFTPDEEIGR-GPERFDVEA---F-GAKYAYTMDGGPL----GELEYESFNAASAKITFKG--NSVHPGTAKNKMVNAVKMAMEFDARIPKDEAP-----------------------------E---------------------YTEGYEGFYHLISLNG----------DVEQARSYYIIRDFDHLKFVERKTHIASIAKELEEKYGEGSVELKLNDQYYNMREKIEPVKEIVDIVSAAMRNL-D--IEPKISPIRGGTDGAQLSYKGLPTPNIFGGG--ENFHGKFEYVALESMVKATEVIIEVARLFEEKE |
| 2POK Chain:A ((44-481)) | --QHYFEVLRTLISKKSVFAQQ-------VGLKEVANYLGEIFKRVGAE-VEIDESYTAPFVMAHFKSSR-PDAKTLIFYNHYDTVPADGDQVW---TEDPFTLS-V----------------------RNGFMYGRGV----DDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESASTDLDKYLEKHADKLRGADLLVWEQGTKNALEQLEISGGNKGIVTFDAKVKSADVDIHSS-YGGVVESAPWYLLQALQSLRAADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIEGIQSGYQGQGVKTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGF----DKVELYYTLGEMSYR--SDMSAPAILNVIELAKKFYPQGVSVLPTTAGTGPMHTVFDALEVPMVAFGLGNANSRDHGGDENVRIADYYTHIELVEELIRSYE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2POK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56404 for 2947 contacts (-19.1/contact) +
2D Compatibility (PS) -39016 + (NN) -17353 + (LL) 2860
1D Compatibility (HY) -10400 + (ID) 2800
Total energy: -123113.0 ( -41.78 by residue)
QMean score : 0.482
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