Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTERGLLIVLSGPSGVGKGTVREAVFKDPETSFDYSISMTTRLPREGEQDGVDYYFRSREVFEQAIKDGKMLEYAEYVGNYYGTPLEYVEEKLAAGVDIFLEIEVQGAMQVRKAM-PEGIFIFLTPPDLSELKNRIIGRGTESMEVVEERMETAKKEIEMM--ASYDYAVVNDVVANAVQKIKGIVETEHLKTERVIHRYKKMLEGLQ
1EX7 Chain:A ((1-184))
----SRPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAETGAHDKVIVNDDLDKAYKELKDFIFA--------------------
General information:
TITO was launched using:
RESULT:
Template:
1EX7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60441 for 1340 contacts (-45.1/contact) +
2D Compatibility (PS) -20429 + (NN) -13889 + (LL) 2480
1D Compatibility (HY) -9200 + (ID) 3300
Total energy: -104779.0 ( -78.19 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_1EX7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EX7-query.scw
PDB file :
Tito_Scwrl_1EX7.pdb
: