Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VLQTEMKVIQQTEIADKVYELILTGEC---VAGMSPGQFLMLKPSRSDLLMRRPISICSYDKTAKTCILLYRVE-----------GDGTRDFSKLSEGDTIDVLGPLGKG-------FDIDTT-------PAPKTALLIGGGIGVPPMYQLGKELAEK---GVQVMFVNGFQSAKDSFYAQEMAEYG-----TVH--IATVD---GSLGTQGFVTD-ITKNFP---EEPDVIYSCGPKAMLQAVK-ASFPETKTYLSLEERMACGIGACYACVCPKADDTNKQFKVCEDGPVFRADEVKL |
| 3W5H Chain:A ((13-262)) | --KYPLRLIDKEVVNHDTRRFRFALPSPEHILGLPVGQHIYLSARIDGNLVIRPYTPVSSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMKIGDTIEFRGPNGLLVYQGKGKFAIRPDKKSSPVIKTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNEHSARFKLWYTVDRAPEAWDYSQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLERV------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111481 for 1507 contacts (-74.0/contact) +
2D Compatibility (PS) -22506 + (NN) -5968 + (LL) 3476
1D Compatibility (HY) -12800 + (ID) 2350
Total energy: -151629.0 ( -100.62 by residue)
QMean score : 0.447
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