Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKLTLNVEGMTCSHCEARVTKALSEVNGVKSAVVSLDEGTATVEFEKGQVMEDALIDAVEEAGYEVA
1OSD Chain:A ((3-68))
-QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPS-
General information:
TITO was launched using:
RESULT:
Template:
1OSD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51938 for 488 contacts (-106.4/contact) +
2D Compatibility (PS) -7254 + (NN) -964 + (LL) 352
1D Compatibility (HY) -4000 + (ID) 1250
Total energy: -65054.0 ( -133.31 by residue)
QMean score : 0.737
(partial model without unconserved sides chains):
PDB file :
Tito_1OSD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OSD-query.scw
PDB file :
Tito_Scwrl_1OSD.pdb
: