Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNWTIWDKSQKVPYTLLLEADPSEKQIAKYLDKSHVFQLMHDDIVIGIICLFPLN---NDQLEIMNIAVSSDYRNQGIGKKLLEKAFDYAIHKH-FIKIIVKTGNSSIDQLAFYQKNGFRMQHIIPNYFTENYPNQTITENGIVCLDQIILLKEIKS
2OB0 Chain:A ((46-155))
----------------------------------LAKLAYFNDIAVGAVCCRVDHSQNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEIIETKKNYYKRIE-----------PADAHVLQKNL--
General information:
TITO was launched using:
RESULT:
Template:
2OB0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78508 for 746 contacts (-105.2/contact) +
2D Compatibility (PS) -11293 + (NN) -1055 + (LL) 2988
1D Compatibility (HY) -5600 + (ID) 1350
Total energy: -94818.0 ( -127.10 by residue)
QMean score : 0.344
(partial model without unconserved sides chains):
PDB file :
Tito_2OB0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OB0-query.scw
PDB file :
Tito_Scwrl_2OB0.pdb
: