Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKYQLVIVGYGGMGSY-HVTLASAADNLEVHGVFDILEEKREAAAEKGLKIYESFEAVLADEKVDAVLIATPNDSHKELAITALEAGKHVVCEKPVTMTSEDLLAIMDVAKKVNKHFMVHQNRRWDEDFLIIKEIFEQKTIGEMFHLESRVHGANG-IPGDWRHLKAHGGGMVLDWGVHLLDQLLFLVDSNVKSVSANLSFAL-GDEVDDGFVTFITFENGITAQIEVGTTNFIKLPRWYVKGTEGTGIIHDWDLS-GEIVQPTALA-KTSEPTPIKAGQGLTKTMAPPSEEATNTLSLPAPAKLAPSFYNNFIDVLNNTSEPIVQNEEVYQVLKLIEAIFEAAETNRTIHSI |
| 3KUX Chain:A ((5-348)) | ADKIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHA-DWPAIPVVSDPQMLFNDPSIDLIVIPTPNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLSVFHNRRWDSDFLTLKTLLAEGSLGNVVYFESHFDRYRPEIRQRWREQ---GGGIWYDLGPHLLDQALQLFG-LPETLNVDLGMLRPGSQSVDYFHAVLSYPGQR-VVLHSTVLAAAETARYIVHGTQGSYIKFGVDPQEDRLKAGERLPQADWGYDMR---DGIV-TLSHDN--VLTEKPLLTLPGNYPAYYAGIRDAIWGTAPNPVPATEAIKVMELIELGIASDQQKKALPI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KUX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186423 for 2764 contacts (-67.4/contact) +
2D Compatibility (PS) -36049 + (NN) -15759 + (LL) 932
1D Compatibility (HY) -15600 + (ID) 4450
Total energy: -257349.0 ( -93.11 by residue)
QMean score : 0.480
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