Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEERLYELEDKVQDLELEVHDLRDRIQLLEDKPDVRSSLLGHNVWVLIPLVAIISWMVVEIFS
1G2C Chain:A ((160-209))
LEGEVNKIKSALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDKQ---LLPIVNK----------
General information:
TITO was launched using:
RESULT:
Template:
1G2C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1675 for 199 contacts (8.4/contact) +
2D Compatibility (PS) -5505 + (NN) -2036 + (LL) 1876
1D Compatibility (HY) -4000 + (ID) 400
Total energy: -8390.0 ( -42.16 by residue)
QMean score : 0.444
(partial model without unconserved sides chains):
PDB file :
Tito_1G2C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G2C-query.scw
PDB file :
Tito_Scwrl_1G2C.pdb
: