Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGQLFNLPQVEDINYIQTVRAVRKFFKDYLMLRVMAGSRKLPTMTTTYKLTPPNFSNEFHSKVEDAAIHNVDNVHAAQEAVKKYDAILNQLEHIHRKILFEKFIHNLQDITIMLDIPYEERQYKREKRKAVIELATTLGIEVLN
2RNJ Chain:A ((143-193))
-------------------------------------------------------------------------------------ELYEMLTEREMEILLL-IAKGYSNQEIASASHITIKTVKTHVSNILSKLEVQ-------
General information:
TITO was launched using:
RESULT:
Template:
2RNJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23683 for 319 contacts (-74.2/contact) +
2D Compatibility (PS) -5401 + (NN) -1211 + (LL) 7076
1D Compatibility (HY) -2400 + (ID) 300
Total energy: -25919.0 ( -81.25 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_2RNJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RNJ-query.scw
PDB file :
Tito_Scwrl_2RNJ.pdb
: