Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------------------------------------------MSGIQWIKLSVNMFDDE----KIKLLEK-----------MPEGNQMLIVWIRLLALAGKTNDKGRIY--LNENVPYTED---MLATLFNRDVGIIRVTLHT---LQSFGMIQKTENGL---IEIENWEKHQNVDGMERVREQTRKRVEKHREAMR--QNRIASG-----DSKGNKECNVTSSVTVTQSNAIDIDKELDKDINNNNSDLNFKDFWEQNGFGMMLPV-ELEKLLAW-----VDDFAGN-------------------REIVMKALEVTSEQGAN--KRNYAYVNKILKNWES----RGFK---TIADVDAAEKQRQIELEQKY--------NKPTYNKYNKPVKEEVLPDWFDKDQKQTKQETSTTG-------SSEDLEKQVAEIKAQLAARNEVQA |
4OPU Chain:A ((2-453)) | MKELKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQTVWTVNHEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTN-EELTVYSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKNKVNVGLGIQGGMGYP-SIHEYYKKYLDKYAPDVDKSKLLVKG--GALVPTRRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGDFSASGLWDMNICYVNEYGAKQASLDIFRRFLQKLSNDDINYGMKKKIIKEEDLLEASEKGDLHLSVADKAMRVISGLGRPSLLFKLKAVAESMKKIKELYLNYPRSPSSLGSWRREVDNVLTEFNKSLS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OPU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 91839 for 2032 contacts (45.2/contact) +
2D Compatibility (PS) -33333 + (NN) -5729 + (LL) 368
1D Compatibility (HY) -4800 + (ID) 3050
Total energy: 45295.0 ( 22.29 by residue)
QMean score : 0.076
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