Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MYRLLSIAFFGIAVICLLFPWMSSGIDAATFELVYEPAYKLIWMQPIIIVGYLGFLCTIFIPKFQRGKNRIVPFIG-ILILVLGLLNLAVRPLFG-FDSFNFSIIDAYVSELVEPAFLIAVSASILSLIMYAIYLKKSENL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4YCZ Chain:B ((66-928)) | SEYRYAALAKDAYQQMGTAPVTEPPQVILGTEDLLSRLYDEKMDDTLATAAAQLAALWREHVDETPFEKANYLANLALQIHHPLPQTLFRWLNEYHMYGSQVDDILRHRPSPACHSLFWQAVFIALKVGDAARLLDQAGWGHVYAYVNVQRAVDETIAVLESCPTLFRVRARGLLEHLRRFAEGWEIYENLNIVFDIVL-----------GQQGAILEAAQD------WLEATVGLANSESYLDRLARAFHTAVESDFVEIGMACVF-----EDNIKGVIGLLRGWSLPIAAAVAEIASLGKWLEVDGIKDSTLVQYAQALADYEGLSSVQDRDGWELSISVLGRMPERSEEMVRDLVEHLVQQLHVDSNATVDRLWFLLNELGMIEFAEDTTETYGDILARDSHRYGEAMWYYALAHRPNKVREVMNLLTSYSLIQPPANDLDDYLYKLLNDRKNTLEQCASQDMEAAELLGKMLSGYASLRQFYDIRPHATPLSRRKQAATALISVIASSDDEDFLLALLGEALVFVSDPTLDQIDVLLKAIEDLQAVGSRVYNACDEFLQLVLASAPGGSSLVASQLQRSLSGTGGEDIMRRLRLGLAKDLAGLWLAEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73960 for 646 contacts (-114.5/contact) +
2D Compatibility (PS) -11659 + (NN) 985 + (LL) 2192
1D Compatibility (HY) 6800 + (ID) 500
Total energy: -76142.0 ( -117.87 by residue)
QMean score : 0.055
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