Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MLKYNIRGENIEVTEPIRDYVEKKIDKLE----------RYFTETPDANVHVNLKVYSDKNAKVEVTI----PLP------NLVLRAE--ETSGDLYASIDLIVDK--LERQIRKHKTKVNRKFRDKGAERDY----FAYSDVNGS------TPPEENEGDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFYVYTDAETNGTNIVYSRKDGKYGLIETN |
| 2W1N Chain:A ((10-237)) | AEVTGSVSLEALEEVQVGENIEVGVGIDELVNAEAFAYDFTLNYDENAFEYVEAISDDGVFVNAKKIEDGKVRVLVSSLTGEPLPAKEVLAKVVLRAEAKTEGSNLSVTNSSVGDGEGLVHEIAGTEKTVNIIEGTSPEIVVNPVRDFKASEINKKNVTVTWTEPETTEGLEGYILYKDGKKVAEIGKDETSYTFKKLNRHTIYNFKIAAKYSNGEVSSK---ESLTLRTA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4612 for 1104 contacts (4.2/contact) +
2D Compatibility (PS) -19108 + (NN) 5342 + (LL) -184
1D Compatibility (HY) -3600 + (ID) 2400
Total energy: -15338.0 ( -13.89 by residue)
QMean score : 0.179
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