Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LAKIKVMSIFGTRPE---AIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIFDIKPDIDLDIMKKGQTLAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGLRTWNKYSPFPEEMNRQLTGVMADIHFSP-TKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQK-----DYHHPILENLGDNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNPAV----REKAMA---ILGGHERIHLIEP---LDAIDFHNFLRKSYLVFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-TLKLIGTNKENLIKEALDLLDNKESHDKMAQAANPYGD-GFAANRILAAIKSHFEETDRPEDFIV |
| 2X6Q Chain:A ((39-414)) | -KGRSFVHVNSTSFGGGVAEILHSLVPLLRSI-G-IEARWFVIEGPTE-FFNVTKTFHN-ALQGNESLKLTEEMKELYLNVNRENSKFIDLSSFDYVLVHDPQPAALI-EF--YEKKSPWLWRCHIDLSSP-NREFW-EFLRRF-VEKYDRYIFHLPEYVQPE-----LDRNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKPIITQVSRFDP--WKGIFDVIEIYRKVKEKIPGVQLL-LVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRA-VGGIKFQIVDGETGFLVR-DANEAVEVVLYLLKHPEVSKEMGAKAKERVRKNFIITKHMERYLDILNSL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X6Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101283 for 2832 contacts (-35.8/contact) +
2D Compatibility (PS) -38141 + (NN) -18554 + (LL) 1952
1D Compatibility (HY) -10400 + (ID) 2600
Total energy: -169026.0 ( -59.68 by residue)
QMean score : 0.418
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