Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTANQMERKKVTIHITNVIRQMDAEEKSDMSVSGVFYRDKGNRYLHYEEKQLAGTIRTVLKIADNELLLMRSGAVNMRMHFFRDNRRSTASVDSGAGKLQLESELVSMEELYENKPDVLSEVAFQYDLLSHGEYIGSYTV------LMKIEEDAE
2X5R Chain:A ((1-124))
---GAMARVGPKIEITHGGKKYTVFSKVTHLVPRTENGEEAEYVVFGPEKE--GVISVVVLAPKD----LNEEALALRVKWFNDTKPRCVKCGAA----------------YNGKNH------FRVVAIRNGTYYLDAVCDKCEPRITWLSAIVI
General information:
TITO was launched using:
RESULT:
Template:
2X5R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3861 for 823 contacts (-4.7/contact) +
2D Compatibility (PS) -12271 + (NN) -713 + (LL) 3756
1D Compatibility (HY) -5600 + (ID) 1050
Total energy: -19739.0 ( -23.98 by residue)
QMean score : 0.155
(partial model without unconserved sides chains):
PDB file :
Tito_2X5R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X5R-query.scw
PDB file :
Tito_Scwrl_2X5R.pdb
: