Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAVGLTKAST----DFVD-IEIDKPVPENHDLLVKIKAISINPVDTKQREAAKL-SGEEVRILGWDAVGEVVDTGSEVT-LFQTGQDVYFAGDVTRPGVYAEYTLIDERLVGLKPHNLNVEEAAAMPLTTITAWEALFDRLTITENDKGKSILIINGAGGVGSIATQLAANTGLEVIATASRSETVEWTKSHGANYVINHREN-IPEQLEELGFKKGVDFILCLHNTSAHWDEMQEAIRPQGKICSIVELTEPVE---M--------T-LLKDKSATFSYEFMFTRSKYDTADKIRQHEILTEAAHMLDKGNLTTTLN--------QVLSPVNAATIEEAHKIISSGKMIGKLVVKGFE |
| 2C0C Chain:A ((24-362)) | MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMA----PGSFAEYTVVPASIATPVPSVK--PEYLTLLVSGTTAYISLKELGGLS---EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPE-GVDVVYES-VGGAMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNH-------YLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFT-GL--ESIFRAVNYMYMGKNTGKIVVELPH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149779 for 2723 contacts (-55.0/contact) +
2D Compatibility (PS) -33169 + (NN) -4982 + (LL) 820
1D Compatibility (HY) -12400 + (ID) 3850
Total energy: -203360.0 ( -74.68 by residue)
QMean score : 0.495
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