Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKKYFITIMILLFGALSLSACQKDDEVENSSPPKVDLKNEIPIILIHGSGGDTHSLDEMADHLMNKYKSSNEAMSMSINSNGKIAYQGALTKDAKRPIIKFGFDQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYFAEDYSNDNAVPTLRKLVAIGSPFNDLDPDDNGDGL-AFNKLPSNTPQLDYFIDKK--TKISTDLEVLSIAGALSEDNL---TDGIVPTNSSLAS----------RLFMPNNAKVYMEDLQVGESAIHQTLHETSESIEKTHWFLEKSSPEKKEIKLISK----- |
| 3BF8 Chain:A ((1-255)) | ---------------MKLNIRAQTAQNQHNNSP---------IVLVHGLFGSLDNLGVLARDLVNDHN----IIQVDVRNHGLSPREPVM---------------------NYPAMAQDLVDTLDAQ-QIDKATFIGHSMGGKAVMALTALAPDR-----IDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQARAHVIAGAGHWVHAE--KPDAVLRAIRRYLNDH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30295 for 1941 contacts (-15.6/contact) +
2D Compatibility (PS) -24574 + (NN) -10212 + (LL) 3388
1D Compatibility (HY) -8400 + (ID) 1750
Total energy: -71843.0 ( -37.01 by residue)
QMean score : 0.256
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