Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRGYYDEISFDVNTTAKKMHLFLLRSIASYDVTPEQWSVLEGIEANEPISQKEIALWTKKDTPTVNRIVDVLLRKELIVREISTEDRRISLLSLTEKGRKETNELRDIVEVSCEKMFAGVERADLEQFTAILKNISTNIE
3KP7 Chain:A ((8-144))
---HISFLEKFINDVNTLTAKLLKDLQTEYGISAEQSHVLNMLSI-EALTVGQITEKQGVNKAAVSRRVKKLLNAELVKL---------KIIKLSNKGKKYIKERKAIMSHIASDMTSDFDSKEIEKVRQVLEIIDYRI-
General information:
TITO was launched using:
RESULT:
Template:
3KP7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45919 for 769 contacts (-59.7/contact) +
2D Compatibility (PS) -13301 + (NN) -2431 + (LL) 924
1D Compatibility (HY) -6000 + (ID) 1350
Total energy: -68077.0 ( -88.53 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_3KP7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KP7-query.scw
PDB file :
Tito_Scwrl_3KP7.pdb
: