Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MILDYNKLKQETKAIVVDIIERSALKKGQIFVLGLSSSEVSGGLIGKNSSSEIGEIIVEVILKELHSRGIYLAVQGCEHVNRALVVEAELAERQQLE-VVNVVPNLHAGGSGQVAAFKLMTSPV--------EVEEIVAHAGIDIGDTSIGMHIKRVQVPLIPISRELGGAHVTALASRPKLIGGARAGYTSDPIRKF |
| 1DDT Chain:? ((200-380)) | SCINLDWDVIRDKTKTKIESLKEHGPIKNKMSE----------------SPNKTVSEEKAKQYLEEFHQTA--LEHPELSELKTVTGTNPVFAGANYAAWAVNVAQVIDSETADNLEKTTAALSILPGIGSVMGIADGAVHHNTEEIVAQSIALSSLMVA-QAIPLVGELVDIGFAAYNFVESIINLFQVVHNSYNRPAY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DDT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45880 for 1313 contacts (-34.9/contact) +
2D Compatibility (PS) -16899 + (NN) 4110 + (LL) 972
1D Compatibility (HY) -2400 + (ID) 1450
Total energy: -61547.0 ( -46.88 by residue)
QMean score : 0.176
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