Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSTIRQVAEKAGVSTSTVSRYISQNGYVSQKASQKIEQAIRELHYVPNFLAQSLKTKKNQLVGLLLPDISNPFFPRLARGVEEFLKEQGYRVMLGNTNNKSHLEEEYLNVLLQSNAAGIITTHDF-TKNHPEIDIPVVVVDRVNQETQYGVFSDNKEGGKLAAQAIWTAGATNILLIRGPLDKADNLNQRFQGSQNYLLNKGARFA-IEDSASFDFAEIQIEAKTLLDHHPDIDSIIAPSDIHAIAYLHEILNRGKRIPEDVQIIGYDDILMSQFIYPSLSTIHQSSYIMGQKAAELIFKITNQLPITNKRIKLPVHYVERETLRRKIDE |
3CTP Chain:A ((60-325)) | ----------------------------------------------------------SKTIGLMVPNISNPFFNQMASVIEEYAKNKGYTLFLCNTDDDKEKEKTYLEVLQSHRVAGIIASRSQCEDEYANIDIPVVAFENHILDNIITISSDNYNGGRMAFDHLYEKGCRKILHIKGPEVF-EATELRYKGFLDGARAKDLEIDFIEFQHDFQVKMLEEDI-NSMKDIVNYDGIFVFNDIAAATVMRALKKRGVSIPQEVQIIGFDNSFIGELLYPSLTTINQPIEALAYTIIELLIKIINGEGVLIEDYIMEVKLIERETTIS---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3CTP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -123319 for 2288 contacts (-53.9/contact) +
2D Compatibility (PS) -28842 + (NN) -17795 + (LL) 5244
1D Compatibility (HY) -18800 + (ID) 4150
Total energy: -187662.0 ( -82.02 by residue)
QMean score : 0.574
|
|
|